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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929151.1_cds_XP_016476539.1_68360
CDS Infomation

[gene=LOC107798094] [db_xref=GeneID:107798094] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X3] [protein_id=XP_016476539.1] [location=join(3382..4328,4477..4796,5602..5724,5877..6001,6070..6280,6375..6612,6710)] [gbkey=CDS]
Sequence

ATGAAAGGGCTACCTTTATTTGTTTGTTCCCAATTACTCTTCATCTTACTAACTTCCACA
GCATTAGACACGATCACTAGAGATAAACCCATTAGAGATGGTGATACAATTGTTTCAGCT
GGTGGGGTTTATGAACTTGGATTTTTCAGCCCTGGAAATTCCAAGAATCGCTATGTTGGG
ATATGGTACAAGAAAATATTACCTACAACTGTCGTCTGGGTTGCCAACAGAAACATTCCA
TTGAATGACACTTCAGGAATGTTAACACTTAAACCCAATGGAACTCTTGTACTTGTCAAC
GGTTCCAATGCCTCAATTTGGTCATCAAACTCATCAAGATCCTTAAAGAATCCAAAAGCA
CGGCTTTTGGATTCGGGGAATCTTGTTGTTAGTGGCAGAAATGATAGAAACGCGGAAATT
AATCTCGTGTGGCAGAGTTTTGACTGTCCAGGAAATACTTTATTGCCTGGCATGAAGCTT
GGACGCAATTTGGTCACAGGCATGAATTGGTACAGATCATCATGGAAGAGCGCGGATGAT
CCTGCTCCTGGTGAATATGTAGACTTTCTTGATTCTCATGGGTACCCGCAATTGTTTGTG
GTGAAAAATTCATCTATAGTATATAGCGTAGGGCCATGGAACGGTGTTGCATTTAGTGGT
AGTCCTAATTCTAAACCAAATATGTATTATACTTTCGAGTTTATTATTAATCAGCAGGAA
ATTTACTACAAATACGAGATTAAGAATGCGTCCCTGCCCACCAGGGTGGTGATCGACGCG
GATGGGGTTGTAGAGCACCTAACATGGATAGAGCGCAGTCAGAGCTGGTTTCTCTACTTG
ACAGCACAATTTGGTAACTGTGATCGTTTTGCTTTATGTGGACCTTATGCAAGCTGCAAC
ATCAATAACTCACCTCCATGTGACTGTCTGAGAGGTTTCGAGCCTAGGTATCCTAATCAA
TGGTATGCAACGGACTGGTCTAGTGGTTGTGTAAGGAGAACTTCTTTGGCTTGTGACCAA
GATGATTTTCTTAAATTAACGGGTATTAAGATGCCGGATTCTAGACAATCGTGGTATAAT
CAGAGCATGAACCTTGAAGAATGCAAAAAAATGTGCTTGGCTGAATGCAATTGTACAGCC
TACTCAAATCTTGATGTTAGAAATGGCGGAAGTGGATGCTTACTATGGTTTGGAGAACTC
ATTGATATTAGAGAGTTGAGCCACAATGAGCAAGACCTGTTCGTGAGAGTCGCTGCTTCA
GAATTAGATTCAGCCAGGAAGCGGAGGAGAAAGAGGTCAACCCTGATTGCTGTCATTTCA
GCAGTAGTAGCAACATTTATCCTCAGCGTCTTAGCTTGGTTTTCCATCCAAAGAAGGAAA
AGAAGAACAGGTTCAGAAGTTCTAAATGAGGACGTGGAGTTGCCATTGTTTGATTTAGTT
GCTGTTACTAGTGCCACTAAGAACTTCTCTTCTGCTAATGTGATTGGTGAGGGGGGCTTT
GGACCAGTTTACAAGGGTATTCTACCAAATGGACAAGAGATAGCAGTAAAGAGGCTATCA
AAGTATTCTGGACAAGGCGTTCAAGAGTTAAAAAATGAAATCGTTCTCATTTCCAAGCTG
CAACACAGGAACCTTGTCAAGCTTTTGGGCTGTTGCCTGGAAGGAGAAGAAAGGATGCTA
ATCTACGAGTTTATGCCAAACACTAGCTTGGACTATTTCATTTTTGATCCAAGCAGAAAT
GCCTCACTTCCATGGAAGAACCGCTTTGAAATTGCTATTGGAATATCTCGAGGACTTCTT
TATCTTCACCAGGACTCAAGATTAAGAATTATTCACAGAGATCTCAAAACCAGCAACATT
TTATTAGATAGTGGCATGAATGCCAAAATTTCTGATTTTGGCCTTGCCAAAATTTTGGGC
GGAGACCAAGTGGAAGGAAAAACAAAGAGAGTCATAGGGACATAA

Peptide Sequence

PEP ID

XP_016476539.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X3 [Nicotiana tabacum]
Sequence

MKGLPLFVCSQLLFILLTSTALDTITRDKPIRDGDTIVSAGGVYELGFFSPGNSKNRYVG
IWYKKILPTTVVWVANRNIPLNDTSGMLTLKPNGTLVLVNGSNASIWSSNSSRSLKNPKA
RLLDSGNLVVSGRNDRNAEINLVWQSFDCPGNTLLPGMKLGRNLVTGMNWYRSSWKSADD
PAPGEYVDFLDSHGYPQLFVVKNSSIVYSVGPWNGVAFSGSPNSKPNMYYTFEFIINQQE
IYYKYEIKNASLPTRVVIDADGVVEHLTWIERSQSWFLYLTAQFGNCDRFALCGPYASCN
INNSPPCDCLRGFEPRYPNQWYATDWSSGCVRRTSLACDQDDFLKLTGIKMPDSRQSWYN
QSMNLEECKKMCLAECNCTAYSNLDVRNGGSGCLLWFGELIDIRELSHNEQDLFVRVAAS
ELDSARKRRRKRSTLIAVISAVVATFILSVLAWFSIQRRKRRTGSEVLNEDVELPLFDLV
AVTSATKNFSSANVIGEGGFGPVYKGILPNGQEIAVKRLSKYSGQGVQELKNEIVLISKL
QHRNLVKLLGCCLEGEERMLIYEFMPNTSLDYFIFDPSRNASLPWKNRFEIAIGISRGLL
YLHQDSRLRIIHRDLKTSNILLDSGMNAKISDFGLAKILGGDQVEGKTKRVIGT

Transcript Sequence

Gene sequence data has not been registered.